diff --git a/README.md b/README.md
index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..a23687ccc97123db7a16b2303d807c79048e8ecd 100644
--- a/README.md
+++ b/README.md
@@ -0,0 +1,72 @@
+Introduction
+=============
+
+KADMOS (Knowledge- and graph-based Agile Design with Multidisciplinary Optimization System) is a new software system which is currently being developed in the [AGILE](http://www.agile-project.eu/) innovation project. It aims at increasing the agility of aircraft design teams that perform multidisciplinary design optimization (MDO). By increased agility, an MDO-based development process is meant that better fits the iterative nature of performing aircraft design. KADMOS has been developed on the notion that performing MDO is analogous to performing music with a large symphonic orchestra, however, in the MDO domain a music notation system is missing, which prevents us from composing large, complex pieces. 
+
+Repository Structure
+====================
+
+The repository is structured as follows:
+
+- dist/
+
+	  contains copies of all major distributions of KADMOS
+
+- docs/
+
+      contains the documentation
+
+- examples/
+
+      contains two example knowlegde bases and scripts
+	  
+	 
+- kadmos/
+
+      contains the main code for KADMOS
+
+      - external
+
+         contains mainly third party scripts used at various parts in the code
+
+      - graph
+
+         contains the main graph-based logic for KADMOS
+
+      - interface
+
+         contains a script for launching a web-based interface for accessing a few KADMOS functionalities
+
+      - knowledgebase
+
+         contains the definition of a knowledge base model
+
+      - utilities
+
+         contains several helper functions
+
+      - rce
+
+         contains code for interfacing with [RCE](http://rcenvironment.de/)
+
+- license.md
+
+      contains the license
+
+- readme.md
+
+      contains this document
+
+
+Credits
+=======
+
+KADMOS is currently being developed at [TU Delft](https://tudelft.nl) by [Imco van Gent](https://bitbucket.org/imcovangent/) as an open source project. KADMOS can still be considered as an early beta and is subjected to change. Ideas and improvement suggestions are greatly appreciated!
+
+
+Changelog
+=========
+
+## 0.5 (31/05/17)
+
+- First public release of KADMOS
\ No newline at end of file
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--- a/dist/kadmos-0.5.dev0.tar.gz.REMOVED.git-id
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-e0530b2b95c70c3e548c45cc0dfc55171015837e
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new file mode 100644
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@@ -0,0 +1 @@
+43779f1120e53970ad1637f9c5b7c4fd0e75d981
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diff --git a/doc/.doctrees/KADMOS.doctree b/doc/.doctrees/KADMOS.doctree
index 46cf7e85298e32606a8fdf6578da437d6e491b00..cdba3c166cc2605207a1ae3e6aac99b921f2bbf2 100644
Binary files a/doc/.doctrees/KADMOS.doctree and b/doc/.doctrees/KADMOS.doctree differ
diff --git a/doc/.doctrees/environment.pickle b/doc/.doctrees/environment.pickle
index 86afe7e3c8aa8432ae53bbebca3067e70c9746a6..6c3fe3933f8941fbe23588e44522bb259dfec557 100644
Binary files a/doc/.doctrees/environment.pickle and b/doc/.doctrees/environment.pickle differ
diff --git a/doc/KADMOS.html b/doc/KADMOS.html
index 9dd4230b5778507ba2e9d7dafdf87615167ac398..9eccaa35c4372bfb192e7f3b1e06dba098eaa776 100644
--- a/doc/KADMOS.html
+++ b/doc/KADMOS.html
@@ -720,7 +720,7 @@ node or edge attributes.</p>
 
 <dl class="method">
 <dt id="kadmos.graph.KadmosGraph.create_visualization_package">
-<code class="descname">create_visualization_package</code><span class="sig-paren">(</span><em>vispack_folder</em>, <em>MPG=None</em>, <em>order=None</em>, <em>open_files=False</em>, <em>no_circleView_variables_data=False</em>, <em>vispack_version=None</em>, <em>reference_file=None</em>, <em>compress=False</em>, <em>remove_after_compress=True</em><span class="sig-paren">)</span><a class="headerlink" href="#kadmos.graph.KadmosGraph.create_visualization_package" title="Permalink to this definition">¶</a></dt>
+<code class="descname">create_visualization_package</code><span class="sig-paren">(</span><em>vispack_folder</em>, <em>MPG=None</em>, <em>order=None</em>, <em>open_files=False</em>, <em>no_circleView_variables_data=False</em>, <em>vispack_version=None</em>, <em>reference_file=None</em>, <em>compress=False</em>, <em>remove_after_compress=True</em>, <em>progress_path=None</em><span class="sig-paren">)</span><a class="headerlink" href="#kadmos.graph.KadmosGraph.create_visualization_package" title="Permalink to this definition">¶</a></dt>
 <dd><p>Function to automatically build the D3.js visualization package of the graphs.</p>
 <table class="docutils field-list" frame="void" rules="none">
 <col class="field-name" />
@@ -946,7 +946,7 @@ used for loading from CMDOWS files. The node is then automatically added to the
 
 <dl class="method">
 <dt id="kadmos.graph.KadmosGraph.export_d3js_files">
-<code class="descname">export_d3js_files</code><span class="sig-paren">(</span><em>MPG=None</em>, <em>order=None</em>, <em>destination_folder=None</em>, <em>open_files=False</em>, <em>no_circleView_variables_data=False</em>, <em>reference_file=None</em><span class="sig-paren">)</span><a class="headerlink" href="#kadmos.graph.KadmosGraph.export_d3js_files" title="Permalink to this definition">¶</a></dt>
+<code class="descname">export_d3js_files</code><span class="sig-paren">(</span><em>MPG=None</em>, <em>order=None</em>, <em>destination_folder=None</em>, <em>open_files=False</em>, <em>no_circleView_variables_data=False</em>, <em>reference_file=None</em>, <em>progress_path=None</em><span class="sig-paren">)</span><a class="headerlink" href="#kadmos.graph.KadmosGraph.export_d3js_files" title="Permalink to this definition">¶</a></dt>
 <dd><p>Function to automatically export the json files required to build the D3.js visualization of the graphs.</p>
 <table class="docutils field-list" frame="void" rules="none">
 <col class="field-name" />
@@ -1075,7 +1075,7 @@ used for loading from CMDOWS files. The node is then automatically added to the
 <li>MDA coupling variable</li>
 <li>initial guess MDA coupling variable</li>
 <li>final MDA coupling variable</li>
-<li>consistency constraint value</li>
+<li>consistency constraint variable</li>
 </ul>
 <p>RCE COMPONENTS:</p>
 <ul class="last simple">
@@ -2500,7 +2500,7 @@ the original graph (this changes the original graph).</dd>
 
 <dl class="method">
 <dt id="kadmos.graph.KadmosGraph.save">
-<code class="descname">save</code><span class="sig-paren">(</span><em>file_name</em>, <em>file_type='kdms'</em>, <em>graph_check_critical=True</em>, <em>destination_folder=None</em>, <em>mpg=None</em>, <em>description=''</em>, <em>creator=''</em>, <em>version='1.0'</em>, <em>timestamp=datetime.datetime(2017</em>, <em>5</em>, <em>29</em>, <em>17</em>, <em>16</em>, <em>47</em>, <em>804000)</em>, <em>keep_empty_elements=False</em>, <em>pretty_print=False</em><span class="sig-paren">)</span><a class="headerlink" href="#kadmos.graph.KadmosGraph.save" title="Permalink to this definition">¶</a></dt>
+<code class="descname">save</code><span class="sig-paren">(</span><em>file_name</em>, <em>file_type='kdms'</em>, <em>graph_check_critical=True</em>, <em>destination_folder=None</em>, <em>mpg=None</em>, <em>description=''</em>, <em>creator=''</em>, <em>version='1.0'</em>, <em>timestamp=datetime.datetime(2017</em>, <em>5</em>, <em>31</em>, <em>16</em>, <em>43</em>, <em>47</em>, <em>767000)</em>, <em>keep_empty_elements=False</em>, <em>pretty_print=False</em><span class="sig-paren">)</span><a class="headerlink" href="#kadmos.graph.KadmosGraph.save" title="Permalink to this definition">¶</a></dt>
 <dd><p>Method to save the graph.</p>
 <p>Different output file types are implemented for saving graphs. They are listed in the following.
 kdms: the most simple file type which makes use of pickling
@@ -3567,7 +3567,7 @@ The graph class is kept.</p>
 
 <dl class="function">
 <dt id="kadmos.utilities.general.export_as_json">
-<code class="descclassname">kadmos.utilities.general.</code><code class="descname">export_as_json</code><span class="sig-paren">(</span><em>data</em>, <em>filename</em>, <em>indent=4</em>, <em>sort_keys=True</em><span class="sig-paren">)</span><a class="headerlink" href="#kadmos.utilities.general.export_as_json" title="Permalink to this definition">¶</a></dt>
+<code class="descclassname">kadmos.utilities.general.</code><code class="descname">export_as_json</code><span class="sig-paren">(</span><em>data</em>, <em>filename</em>, <em>indent=4</em>, <em>sort_keys=True</em>, <em>cwd=None</em><span class="sig-paren">)</span><a class="headerlink" href="#kadmos.utilities.general.export_as_json" title="Permalink to this definition">¶</a></dt>
 <dd><p>Function to export a data object to a json file.</p>
 <table class="docutils field-list" frame="void" rules="none">
 <col class="field-name" />
@@ -3577,8 +3577,8 @@ The graph class is kept.</p>
 <li><strong>data</strong> (<em>dict or list</em>) &#8211; object with the data to be exported</li>
 <li><strong>filename</strong> (<em>basestring</em>) &#8211; name of the json file</li>
 <li><strong>indent</strong> (<em>int</em>) &#8211; number of spaces for one indentation</li>
-<li><strong>sort_keys</strong> &#8211; option for sorting keys</li>
-<li><strong>sort_keys</strong> &#8211; bool</li>
+<li><strong>sort_keys</strong> (<em>bool</em>) &#8211; option for sorting keys</li>
+<li><strong>cwd</strong> (<em>None, str</em>) &#8211; current working directory</li>
 </ul>
 </td>
 </tr>
diff --git a/doc/searchindex.js b/doc/searchindex.js
index 83e1c3bde2740304a8da2cb09776cc050b6c0389..791d91a4471f09f20b57931dd0b3cab3d90cb2e7 100644
--- a/doc/searchindex.js
+++ b/doc/searchindex.js
@@ -1 +1 @@
-Search.setIndex({envversion:46,filenames:["KADMOS"],objects:{"":{kadmos:[0,0,0,"-"]},"kadmos.graph":{FundamentalProblemGraph:[0,3,1,""],KadmosGraph:[0,3,1,""],MdaoDataGraph:[0,3,1,""],MdaoProcessGraph:[0,3,1,""],RepositoryConnectivityGraph:[0,3,1,""]},"kadmos.graph.FundamentalProblemGraph":{add_function_problem_roles:[0,1,1,""],cleancopy:[0,1,1,""],create_mdg:[0,1,1,""],create_mpg:[0,1,1,""],get_coupling_matrix:[0,1,1,""],get_mdg:[0,1,1,""],get_mg_function_ordering:[0,1,1,""],get_mpg:[0,1,1,""],mark_as_constraint:[0,1,1,""],mark_as_design_variable:[0,1,1,""],mark_as_objective:[0,1,1,""],mark_as_qoi:[0,1,1,""]},"kadmos.graph.KadmosGraph":{add_cycle:[0,1,1,""],add_edge:[0,1,1,""],add_edges_from:[0,1,1,""],add_node:[0,1,1,""],add_nodes_from:[0,1,1,""],add_nodes_subcategory:[0,1,1,""],add_objective_function_by_nodes:[0,1,1,""],add_path:[0,1,1,""],add_star:[0,1,1,""],add_to_visualization_package:[0,1,1,""],add_weighted_edges_from:[0,1,1,""],adjacency_iter:[0,1,1,""],adjacency_list:[0,1,1,""],adjlist_dict_factory:[0,4,1,""],check:[0,1,1,""],check_cmdows_integrity:[0,1,1,""],check_for_coupling:[0,1,1,""],cleancopy:[0,1,1,""],clear:[0,1,1,""],copy:[0,1,1,""],copy_node_with_suffix:[0,1,1,""],count_function_nodes:[0,1,1,""],create_dsm:[0,1,1,""],create_visualization_package:[0,1,1,""],degree:[0,1,1,""],degree_iter:[0,1,1,""],disconnect_problematic_variables_from:[0,1,1,""],edge_attr_dict_factory:[0,4,1,""],edges:[0,1,1,""],edges_iter:[0,1,1,""],expand_node:[0,1,1,""],export_d3js_files:[0,1,1,""],find_all_nodes:[0,1,1,""],get_adjacency_matrix:[0,1,1,""],get_categorized_nodes:[0,1,1,""],get_contracted_graph:[0,1,1,""],get_direct_coupling_nodes:[0,1,1,""],get_edge_data:[0,1,1,""],get_function_graph:[0,1,1,""],get_function_metadata:[0,1,1,""],get_function_nodes:[0,1,1,""],get_graph_nodes_indegree:[0,1,1,""],get_graph_nodes_outdegree:[0,1,1,""],get_graph_properties:[0,1,1,""],get_node_attributes:[0,1,1,""],get_node_subcategory:[0,1,1,""],get_nodes_based_on_strings:[0,1,1,""],get_number_of_couplings:[0,1,1,""],get_partitioned_graph:[0,1,1,""],get_sources:[0,1,1,""],get_subgraph_by_function_nodes:[0,1,1,""],get_system_inputs:[0,1,1,""],get_targets:[0,1,1,""],has_edge:[0,1,1,""],has_node:[0,1,1,""],has_nodes:[0,1,1,""],has_predecessor:[0,1,1,""],has_successor:[0,1,1,""],in_degree:[0,1,1,""],in_degree_iter:[0,1,1,""],in_edges:[0,1,1,""],in_edges_iter:[0,1,1,""],inspect:[0,1,1,""],inspect_node:[0,1,1,""],inspect_nodes:[0,1,1,""],is_directed:[0,1,1,""],is_multigraph:[0,1,1,""],make_all_variables_valid:[0,1,1,""],merge_function_modes:[0,1,1,""],merge_function_nodes_based_on_modes:[0,1,1,""],merge_parallel_functions:[0,1,1,""],merge_sequential_functions:[0,1,1,""],nbunch_iter:[0,1,1,""],neighbors:[0,1,1,""],neighbors_iter:[0,1,1,""],node_dict_factory:[0,4,1,""],node_is_function:[0,1,1,""],node_is_hole:[0,1,1,""],node_is_objective_function:[0,1,1,""],node_is_output:[0,1,1,""],node_is_variable:[0,1,1,""],nodes:[0,1,1,""],nodes_iter:[0,1,1,""],nodes_with_selfloops:[0,1,1,""],number_of_edges:[0,1,1,""],number_of_nodes:[0,1,1,""],number_of_selfloops:[0,1,1,""],order:[0,1,1,""],out_degree:[0,1,1,""],out_degree_iter:[0,1,1,""],out_edges:[0,1,1,""],out_edges_iter:[0,1,1,""],plot_adjacency_matrix:[0,1,1,""],plot_graph:[0,1,1,""],predecessors:[0,1,1,""],predecessors_iter:[0,1,1,""],print_graph:[0,1,1,""],remove_edge:[0,1,1,""],remove_edges_from:[0,1,1,""],remove_function_nodes:[0,1,1,""],remove_node:[0,1,1,""],remove_nodes_from:[0,1,1,""],reverse:[0,1,1,""],save:[0,1,1,""],select_objectives_from_graph:[0,1,1,""],selfloop_edges:[0,1,1,""],size:[0,1,1,""],split_all_variables:[0,1,1,""],split_variables:[0,1,1,""],subgraph:[0,1,1,""],successors:[0,1,1,""],successors_iter:[0,1,1,""],to_directed:[0,1,1,""],to_undirected:[0,1,1,""]},"kadmos.graph.MdaoDataGraph":{cleancopy:[0,1,1,""],connect_converger:[0,1,1,""],connect_coordinator:[0,1,1,""],connect_doe_block:[0,1,1,""],connect_nodes_as_output:[0,1,1,""],connect_optimizer:[0,1,1,""],connect_qoi_nodes_as_input:[0,1,1,""],copy_node_as:[0,1,1,""],manipulate_coupling_nodes:[0,1,1,""]},"kadmos.graph.MdaoProcessGraph":{add_parallel_process:[0,1,1,""],add_simple_sequential_process:[0,1,1,""],cleancopy:[0,1,1,""],connect_nested_iterators:[0,1,1,""],get_nested_process_ordering:[0,1,1,""],get_node_text:[0,1,1,""],get_process_list:[0,1,1,""],inspect_process:[0,1,1,""]},"kadmos.graph.RepositoryConnectivityGraph":{cleancopy:[0,1,1,""],get_fpg_based_on_function_nodes:[0,1,1,""],get_fpg_based_on_list_functions:[0,1,1,""],get_fpg_based_on_sinks:[0,1,1,""],get_fpg_by_function_nodes:[0,1,1,""],get_function_paths_by_objective:[0,1,1,""],get_path_combinations:[0,1,1,""],select_function_combination_from:[0,1,1,""]},"kadmos.utilities":{general:[0,0,0,"-"]},"kadmos.utilities.general":{color_list:[0,2,1,""],export_as_json:[0,2,1,""],extend_list_uniquely:[0,2,1,""],format_string_for_d3js:[0,2,1,""],get_friendly_id:[0,2,1,""],get_list_entries:[0,2,1,""],get_mdao_setup:[0,2,1,""],get_schema:[0,2,1,""],get_unique_friendly_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diff --git a/setup.py b/setup.py
index 0833d70c09050d30021cbbd4242d083f488d0742..2e4d24f1c8b8c3d3620dd666924230b21fd8d6f1 100644
--- a/setup.py
+++ b/setup.py
@@ -1,7 +1,7 @@
 from setuptools import setup, find_packages
 
 
-version = '0.5dev'
+version = '0.5'
 
 
 def readme():