diff --git a/book/_config.yml b/book/_config.yml
index 0d07020fc0d3a2b9de33189d55e11bc085e2eaec..aa068d9cab77df3e95991e5112f997cfc7aebdbc 100644
--- a/book/_config.yml
+++ b/book/_config.yml
@@ -22,6 +22,3 @@ bibtex_bibfiles:
launch_buttons:
thebe: true
-repository:
- url: https://gitlab.tudelft.nl/mude/book # Online location of your book
- branch: main # Which branch of the repository should be used when creating links (optional)
diff --git a/book/_toc.yml b/book/_toc.yml
index 66ab5224241be9d7b1466eb6ec02eeff8f7b2b20..225ffcb6561a38b79f4c43dfed30028b12721df5 100644
--- a/book/_toc.yml
+++ b/book/_toc.yml
@@ -45,6 +45,9 @@ parts:
- file: sandbox/SanPart/premath/00_01c_PreMath.md
- file: sandbox/SanPart/premath/00_02_PreMath.md
- file: sandbox/SanPart/premath/00_03_PreMath.md
+ - file: sandbox/it
+ sections:
+ - file: sandbox/it-benchmark_dont_execute.ipynb
- caption: MUDE Cookbook
chapters:
- file: cookbook/blank
@@ -176,4 +179,4 @@ parts:
- file: old/coding/2-2/1_1_dont_execute.ipynb
- file: old/coding/2-2/1_2_dont_execute.ipynb
- file: old/coding/2-2/1-part-2.md
- - file: old/coding/2-2/1-part-3.md
\ No newline at end of file
+ - file: old/coding/2-2/1-part-3.md
diff --git a/book/sandbox/it-benchmark_dont_execute.ipynb b/book/sandbox/it-benchmark_dont_execute.ipynb
new file mode 100644
index 0000000000000000000000000000000000000000..4cb5a3dcbd222fb5882764b7bf53fa70c1b3588d
--- /dev/null
+++ b/book/sandbox/it-benchmark_dont_execute.ipynb
@@ -0,0 +1,54 @@
+{
+ "cells": [
+ {
+ "cell_type": "markdown",
+ "metadata": {},
+ "source": [
+ "# Benchmarks"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": [
+ "with open(\"reading_test.txt\") as f:\n",
+ " print(f.read())"
+ ]
+ },
+ {
+ "cell_type": "code",
+ "execution_count": null,
+ "metadata": {},
+ "outputs": [],
+ "source": []
+ }
+ ],
+ "metadata": {
+ "kernelspec": {
+ "display_name": "Python 3 (ipykernel)",
+ "language": "python",
+ "name": "python3"
+ },
+ "language_info": {
+ "codemirror_mode": {
+ "name": "ipython",
+ "version": 3
+ },
+ "file_extension": ".py",
+ "mimetype": "text/x-python",
+ "name": "python",
+ "nbconvert_exporter": "python",
+ "pygments_lexer": "ipython3",
+ "version": "3.10.9"
+ },
+ "vscode": {
+ "interpreter": {
+ "hash": "a67e065d7bac6c9a1464b57d1c6c9ee143117011e86b73963744a6c83e2c9c0b"
+ }
+ }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}
diff --git a/book/sandbox/it.md b/book/sandbox/it.md
new file mode 100644
index 0000000000000000000000000000000000000000..fee61fb3da70d23180f30263f8383207d7ff7e66
--- /dev/null
+++ b/book/sandbox/it.md
@@ -0,0 +1,6 @@
+# IT Benchmarks
+
+Some benchmarks for any IT stuff going on in here.
+
+```{tableofcontents}
+```
\ No newline at end of file
diff --git a/book/sandbox/reading_test.txt b/book/sandbox/reading_test.txt
new file mode 100644
index 0000000000000000000000000000000000000000..f74068ca4a7f23ad27b1d057f76b4d4f5fa5757a
--- /dev/null
+++ b/book/sandbox/reading_test.txt
@@ -0,0 +1 @@
+Hopefully we can read this!
diff --git a/book/thebe_lite/sphinx-thebe.js b/book/thebe_lite/sphinx-thebe.js
index 1d1754626c06ef161e39f8a13f2cfb8b47886a06..a0ca901ba944e3ca6c39787726f954877b76e61c 100644
--- a/book/thebe_lite/sphinx-thebe.js
+++ b/book/thebe_lite/sphinx-thebe.js
@@ -130,19 +130,71 @@ const loadStyleAsync = async (styleSource) => {
});
};
+function override_pyodide_open(fs, home, server_path) {
+ const old_open = fs.open;
+ function new_open(path, flags, mode) {
+ console.log(`Params: ${path}, ${flags}, ${mode}`);
+ // Being called from writeFile, or in write mode, we don't want to load in that case
+ // This catches any errors caused by things like missing directories
+ if (flags === 577) {
+ console.log("Running old open");
+ return old_open(path, flags, mode);
+ }
+
+ console.log(`Params: ${path}, ${flags}, ${mode}`);
+ try {
+ return old_open(path, flags, mode);
+ } catch {
+ const fullPath = path;
+ // Remove '/home/pyodide' or '/home/drive' etc.
+ if (path.startsWith(home)) {
+ path = path.slice(home.length);
+ }
+
+ // Last entry is the file itself
+ let directories = fullPath.split("/").slice(0, -1);
+ let currentDirectory = "/";
+
+ for (const directory of directories) {
+ if (directory === "") continue;
+ currentDirectory += directory + "/";
+ try {
+ fs.mkdir(currentDirectory);
+ console.log(`Made up to: ${currentDirectory}`);
+ } catch {}
+ }
+
+ let request = new XMLHttpRequest();
+ // Fetch relative to where we are in the server, to simulate how it works in notebooks
+ // We will still put it in the directory requested by pyodide however, so the next call to open succeeds without tampering
+ const requestFrom = path[0] === "/" ? path : server_path + path;
+ console.log(`Requesting from: ${requestFrom}`);
+ request.open("GET", requestFrom, false);
+ request.send();
+
+ if (request.status !== 200) {
+ throw new fs.ErrnoError(44);
+ }
+ fs.writeFile(fullPath, request.response);
+
+ return old_open(fullPath, flags, mode);
+ }
+ }
+ fs.open = new_open;
+}
var initThebe = async () => {
// Load thebe dynamically if it's not already loaded
if (typeof thebelab === "undefined") {
console.log("[sphinx-thebe]: Loading thebe...");
$(".thebe-launch-button ").css("display", "none");
-
+
// Provides nice things like a running animation and some padding
{
await loadStyleAsync("/thebe.css");
await loadStyleAsync("/_static/code.css");
}
-
+
$(".thebe-launch-button ").css("display", "block");
$(".thebe-launch-button ").text("Loading thebe...");
@@ -153,7 +205,12 @@ var initThebe = async () => {
console.log("[sphinx-thebe]: Finished loading thebe...");
configureThebe();
modifyDOMForThebe();
- thebelab.bootstrap(thebeLiteConfig);
+ await thebelab.bootstrap(thebeLiteConfig);
+ await thebelab.session.kernel.requestExecute({
+ code: `import js; from os import getcwd; import pyodide_js; js.fs = pyodide_js.FS; js.eval("""${override_pyodide_open.toString()}"""); js.eval(f"override_pyodide_open(fs, '{getcwd()}/', ${
+ location.pathname.split("/").slice(0, -1).join("/") + "/"
+ })")`,
+ });
} else {
console.log("[sphinx-thebe]: thebe already loaded...");
}
@@ -168,4 +225,3 @@ var detectLanguage = (language) => {
}
return language;
};
-
diff --git a/build-lite.sh b/build-lite.sh
index 426703f9c7afe77553dff906753cd6b2c8a86406..eeeb7be6fa3124ce1ac45e30ab9d5696553e8a78 100755
--- a/build-lite.sh
+++ b/build-lite.sh
@@ -17,4 +17,8 @@ else
fi
fi
+# Copy all non notebook, markdown or build files into the build for local access in pyodide etc.
+find book/ | grep -v "^book/_.*\|.*\.\(md\|ipynb\)\|thebe_lite" | grep "\." | cut -c 6- | xargs -i sh -c 'echo "book/_build/html/{}" | grep -o "^.*/" | xargs -d "\n" mkdir -p; cp book/"{}" book/_build/html/"{}"'
+
$python_command -m http.server 8000 --directory book/_build/html &
+