From 147398461f0c82fad829e67eb613020b13b965c1 Mon Sep 17 00:00:00 2001
From: Pat Alt <55311242+pat-alt@users.noreply.github.com>
Date: Fri, 22 Sep 2023 11:10:50 +0200
Subject: [PATCH] phew
---
Project.toml | 1 -
experiments/benchmarking/benchmarking.jl | 2 +-
experiments/mnist.jl | 2 +-
experiments/setup_env.jl | 2 +-
src/penalties.jl | 1 -
5 files changed, 3 insertions(+), 5 deletions(-)
diff --git a/Project.toml b/Project.toml
index cc58ad66..c57589f5 100644
--- a/Project.toml
+++ b/Project.toml
@@ -19,7 +19,6 @@ MLJEnsembles = "50ed68f4-41fd-4504-931a-ed422449fee0"
MLJFlux = "094fc8d1-fd35-5302-93ea-dabda2abf845"
MLJModelInterface = "e80e1ace-859a-464e-9ed9-23947d8ae3ea"
MLUtils = "f1d291b0-491e-4a28-83b9-f70985020b54"
-MultivariateStats = "6f286f6a-111f-5878-ab1e-185364afe411"
Parameters = "d96e819e-fc66-5662-9728-84c9c7592b0a"
PkgTemplates = "14b8a8f1-9102-5b29-a752-f990bacb7fe1"
Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
diff --git a/experiments/benchmarking/benchmarking.jl b/experiments/benchmarking/benchmarking.jl
index 91dca412..61164009 100644
--- a/experiments/benchmarking/benchmarking.jl
+++ b/experiments/benchmarking/benchmarking.jl
@@ -8,7 +8,7 @@ function default_generators(;
nsamples::Union{Nothing,Int}=nothing,
nmin::Union{Nothing,Int}=nothing,
reg_strength::Real=0.5,
- dim_reduction::Union{Nothing,Int}=nothing,
+ dim_reduction::Bool=false,
)
@info "Begin benchmarking counterfactual explanations."
diff --git a/experiments/mnist.jl b/experiments/mnist.jl
index 14cc4244..07c6d11e 100644
--- a/experiments/mnist.jl
+++ b/experiments/mnist.jl
@@ -13,7 +13,7 @@ counterfactual_data.generative_model = vae
# Dimensionality reduction:
maxout_dim = vae.params.latent_dim
-counterfactual_data.dt = MultivariateStats.fit(PCA, counterfactual_data.X; maxoutdim=maxout_dim);
+counterfactual_data.dt = MultivariateStats.fit(MultivariateStats.PCA, counterfactual_data.X; maxoutdim=maxout_dim);
# Test data:
test_data = load_mnist_test()
diff --git a/experiments/setup_env.jl b/experiments/setup_env.jl
index 8757410a..568260ea 100644
--- a/experiments/setup_env.jl
+++ b/experiments/setup_env.jl
@@ -23,12 +23,12 @@ using MLJ: TunedModel, Grid, CV, fitted_params, report
using MLJBase: multiclass_f1score, accuracy, multiclass_precision, table, machine, fit!, Supervised
using MLJEnsembles
using MLJFlux
-using MultivariateStats
using Random
using Serialization
using Statistics
import MPI
+import MultivariateStats
Random.seed!(2023)
diff --git a/src/penalties.jl b/src/penalties.jl
index c4272dd5..6e7dad33 100644
--- a/src/penalties.jl
+++ b/src/penalties.jl
@@ -4,7 +4,6 @@ using Distances
using Flux
using Images: assess_ssim
using LinearAlgebra: norm
-using MultivariateStats
using Statistics: mean
"""
--
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