diff --git a/experiments/jobscripts/testing/lin_sep.sh b/experiments/jobscripts/testing/lin_sep.sh index 96345366a28f4fe9f190c944a16ee61aefd4c263..9c8af82c873a100a786a7e2d64cbca82bc57e42e 100644 --- a/experiments/jobscripts/testing/lin_sep.sh +++ b/experiments/jobscripts/testing/lin_sep.sh @@ -9,10 +9,8 @@ #SBATCH --account=research-eemcs-insy #SBATCH --mail-type=END # Set mail type to 'END' to receive a mail when the job finishes. -module load 2023r1 julia module load openmpi -set -x -export SRUN_CPUS_PER_TASK="$SLURM_CPUS_PER_TASK" +source experiments/slurm_header.sh srun julia --project=experiments --threads $SLURM_CPUS_PER_TASK experiments/run_experiments.jl -- data=linearly_separable output_path=results mpi grid_search n_individuals=10 threaded > experiments/grid_search_linearly_separable.log diff --git a/experiments/slurm_header.sh b/experiments/slurm_header.sh new file mode 100644 index 0000000000000000000000000000000000000000..48da377bd91e7bfbfd678f08a77090dfafeda755 --- /dev/null +++ b/experiments/slurm_header.sh @@ -0,0 +1,3 @@ +set -x # keep log of executed commands +export SRUN_CPUS_PER_TASK="$SLURM_CPUS_PER_TASK" # assign extra environment variable to be safe +export OPENBLAS_NUM_THREADS=1 # avoid that OpenBLAS calls too many threads \ No newline at end of file