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This is the starting page for the cryo-EM Image Processing Practicals of the course High-Resolution Imaging.
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### Practical 1 – Fundamentals of Image Processing
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The practicals are computational assignments in the form of interactive Jupyter notebooks hosted on a public server. These notebooks contain code that can be executed to perform certain tasks or visualise results; you do not need any active knowledge of coding to work through the notebook. The notebook contains code fields such as the one below:
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Launch the virtual learning environment by clicking on the button below.
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[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/git/https%3A%2F%2Fgitlab.tudelft.nl%2Faj-lab%2Fteaching.git/master)
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<img src="https://gitlab.tudelft.nl/aj-lab/teaching/raw/master/binder/images/manual.jpg" width="800;">
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Navigate to the `binder` folder and then start the file __`hri_practial01`__ folder and start ip_basics_part1.ipynb by clicking on it or simply click [here]().
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This should open a Jupyter notebook containing your practical assignment.
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The Jupyter Notebook contains code fields such as the one below:
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In order to execute these code fields you need to click on the field (which becomes highlighted as above). The order is important, so please work your way through the notebook from the beginning to the end. Also do read the accompanying text - it will explain everything necessary for you to successfully work through the assignment.
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### Practical 1 – Fundamentals of Image Processing
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<img src="https://gitlab.tudelft.nl/aj-lab/teaching/raw/master/binder/images/manual.jpg" width="800;">
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Launch the virtual learning environment by clicking on the button below.
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[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/git/https%3A%2F%2Fgitlab.tudelft.nl%2Faj-lab%2Fteaching.git/master)
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In order to execute these code fields you need to click on the field (which becomes highlighted as above). The order is important, so please work your way through the notebook from the beginning to the end. Also do read the accompanying text - it will explain everything necessary for you to succesfully work through the assignment
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Navigate to the `binder` folder and then start the file __`hri_practial01`__ folder and start ip_basics_part1.ipynb by clicking on it or simply click [here]().
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This should open a Jupyter notebook containing your practical assignment.
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__You can find the solutions to this practical in the solutions folder when launching binder.__
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<br>
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### Practical 2.5 – 3D reconstruction by projection matching and Maximum Likelihood methods
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