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MUDE
2024-files
Commits
dd446509
Commit
dd446509
authored
6 months ago
by
Kwangjin Lee
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add the algorithm to check changes
parent
7547e59e
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Pipeline
#250905
failed
6 months ago
Stage: check_changes
Stage: process
Stage: deploy
Changes
1
Pipelines
2
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1 changed file
.gitlab-ci.yml
+67
-164
67 additions, 164 deletions
.gitlab-ci.yml
with
67 additions
and
164 deletions
.gitlab-ci.yml
+
67
−
164
View file @
dd446509
...
...
@@ -10,192 +10,95 @@ cache:
-
.pip-cache/
stages
:
-
setup
-
check_changes
-
process
-
sync
-
deploy
.install_dependencies
:
before_script
:
-
apt-get update && apt-get install -y curl
-
apt-get update && apt-get install -y curl
jq
-
pip install jupytext nbconvert
setup
:
stage
:
setup
extends
:
.install_dependencies
check_changes
:
stage
:
check_changes
script
:
-
echo "Dependencies installed successfully"
-
|
changes=$(git diff --name-only $CI_COMMIT_BEFORE_SHA $CI_COMMIT_SHA)
if echo "$changes" | grep -qvE "^src/"; then
echo "FULL_PROCESS=true" >> pipeline.env
else
echo "FULL_PROCESS=false" >> pipeline.env
fi
echo "$changes" > changed_files.txt
artifacts
:
reports
:
dotenv
:
pipeline.env
paths
:
-
.pip-cache/
-
changed_files.txt
process_notebooks
:
stage
:
process
extends
:
.install_dependencies
script
:
-
|
for notebook in $(find ./src -name "*.ipynb"); do
clean_notebook=$(echo $notebook | sed 's/src/clean/')
mkdir -p $(dirname $clean_notebook)
cp $notebook $clean_notebook
jupyter nbconvert --ClearOutputPreprocessor.enabled=True --to notebook --inplace $clean_notebook
jupytext --to md $clean_notebook
jupytext --to py:percent $clean_notebook
done
artifacts
:
paths
:
-
clean/
create_sync_script
:
stage
:
process
script
:
-
|
cat << EOF > sync_notebooks.py
import os
import sys
import jupytext
from nbformat import read, write, NO_CONVERT
import difflib
def sync_notebooks(source_dir, clean_dir)
:
for root, _, files in os.walk(source_dir)
:
for file in files
:
if file.endswith('.ipynb')
:
source_path = os.path.join(root, file)
clean_path = source_path.replace(source_dir, clean_dir)
md_path = clean_path.replace('.ipynb', '.md')
py_path = clean_path.replace('.ipynb', '.py')
# Regenerate parallel files if original nb changed
if os.path.exists(source_path) and (not os.path.exists(clean_path) or
os.path.getmtime(source_path) > os.path.getmtime(clean_path))
:
print(f"Updating clean files from {source_path}")
nb = read(source_path, as_version=NO_CONVERT)
jupytext.write(nb, clean_path)
jupytext.write(nb, md_path)
jupytext.write(nb, py_path)
# Check for edits in parallel files and update notebook
elif os.path.exists(clean_path) and os.path.getmtime(clean_path) > os.path.getmtime(source_path)
:
print(f"Checking for updates in clean files for {source_path}")
source_nb = read(source_path, as_version=NO_CONVERT)
clean_nb = jupytext.read(clean_path)
if source_nb['cells'] != clean_nb['cells']
:
print(f"Conflicts detected in {file}")
with open(f"{clean_path}.conflicts", 'w') as f
:
f.write(f"Conflicts detected between {source_path} and {clean_path}\\n")
f.write("Diff:\\n")
for i, (s_cell, c_cell) in enumerate(zip(source_nb['cells'], clean_nb['cells']))
:
if s_cell != c_cell
:
f.write(f"Cell {i}:\\n")
diff = difflib.unified_diff(
s_cell['source'].splitlines(),
c_cell['source'].splitlines(),
fromfile='source',
tofile='clean',
lineterm=''
)
f.write('\\n'.join(diff))
f.write('\\n\\n')
else
:
print(f"Updating source notebook from {clean_path}")
write(clean_nb, source_path)
if __name__ == "__main__"
:
if len(sys.argv) != 3
:
print("Usage
:
python sync_notebooks.py <source_dir> <clean_dir>")
sys.exit(1)
source_dir = sys.argv[1]
clean_dir = sys.argv[2]
sync_notebooks(source_dir, clean_dir)
EOF
artifacts
:
paths
:
- sync_notebooks.py
sync_notebooks
:
stage
:
sync
extends
:
.install_dependencies
script
:
-
python sync_notebooks.py ./src ./clean
-
|
if [ -n "$(find . -name '*.conflicts')" ]; then
echo "Conflicts detected. Please review the .conflicts files."
exit 1
if [ "$FULL_PROCESS" = "true" ]; then
for notebook in $(find ./src -name "*.ipynb"); do
clean_notebook=$(echo $notebook | sed 's/src/clean/')
mkdir -p $(dirname $clean_notebook)
cp $notebook $clean_notebook
jupyter nbconvert --ClearOutputPreprocessor.enabled=True --to notebook --inplace $clean_notebook
jupytext --to md $clean_notebook
jupytext --to py:percent $clean_notebook
done
else
echo "Skipping full processing"
fi
artifacts
:
paths
:
-
src/
-
clean/
-
"
**/*.conflicts"
when
:
always
.
deploy
_template
:
deploy
:
stage
:
deploy
extends
:
.install_dependencies
script
:
-
echo "Deploying files from src directory"
deploy-draft-students
:
extends
:
.deploy_template
script
:
-
!reference
[
.deploy_template
,
script
]
-
|
curl -X POST "${WEBHOOK_URL}/files-sync-students-draft" \
-H "Content-Type: application/json" \
-H "X-Gitlab-Token: ${WEBHOOK_TOKEN}" \
-d '{
"object_kind": "pipeline",
"object_attributes": {
"status": "success",
"ref": "main"
}
}'
rules
:
-
if
:
$CI_COMMIT_BRANCH == "main"
changes
:
-
src/students/**/*
when
:
always
deploy-teachers
:
extends
:
.deploy_template
script
:
-
!reference
[
.deploy_template
,
script
]
-
|
curl -X POST "${WEBHOOK_URL}/files-sync-teachers" \
-H "Content-Type: application/json" \
-H "X-Gitlab-Token: ${WEBHOOK_TOKEN}" \
-d '{
"object_kind": "pipeline",
"object_attributes": {
"status": "success",
"ref": "main"
}
}'
rules
:
-
if
:
$CI_COMMIT_BRANCH == "main"
changes
:
-
src/teachers/**/*
when
:
always
deploy-production-students
:
extends
:
.deploy_template
script
:
-
!reference
[
.deploy_template
,
script
]
-
|
curl -X POST "${WEBHOOK_URL}/files-sync-students" \
-H "Content-Type: application/json" \
-H "X-Gitlab-Token: ${WEBHOOK_TOKEN}" \
-d '{
"object_kind": "pipeline",
"object_attributes": {
"status": "success",
"ref": "release"
}
}'
rules
:
-
if
:
$CI_COMMIT_BRANCH == "release"
changes
:
-
src/students/**/*
when
:
always
\ No newline at end of file
changed_files=$(cat changed_files.txt | jq -R -s -c 'split("\n")')
full_process=$FULL_PROCESS
deploy_payload=$(jq -n \
--arg kind "pipeline" \
--arg status "success" \
--arg ref "$CI_COMMIT_REF_NAME" \
--argjson changes "$changed_files" \
--argjson full_process $full_process \
'{
object_kind: $kind,
object_attributes: {
status: $status,
ref: $ref
},
changes: $changes,
full_process: $full_process
}')
if [[ "$CI_COMMIT_BRANCH" == "main" && "$changed_files" == *"src/students/"* ]]; then
curl -X POST "${WEBHOOK_URL}/files-sync-students-draft" \
-H "Content-Type: application/json" \
-H "X-Gitlab-Token: ${WEBHOOK_TOKEN}" \
-d "$deploy_payload"
fi
if [[ "$CI_COMMIT_BRANCH" == "main" && "$changed_files" == *"src/teachers/"* ]]; then
curl -X POST "${WEBHOOK_URL}/files-sync-teachers" \
-H "Content-Type: application/json" \
-H "X-Gitlab-Token: ${WEBHOOK_TOKEN}" \
-d "$deploy_payload"
fi
if [[ "$CI_COMMIT_BRANCH" == "release" && "$changed_files" == *"src/students/"* ]]; then
curl -X POST "${WEBHOOK_URL}/files-sync-students" \
-H "Content-Type: application/json" \
-H "X-Gitlab-Token: ${WEBHOOK_TOKEN}" \
-d "$deploy_payload"
fi
\ No newline at end of file
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