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Fix setpoints (issue #6)

Sander Snoorequested to merge
setpoint_fix into master

Created by: sldesnoo-Delft

@stephanlphilips @lpetitTUD can you review the fix? The essence of the change is that setpoints are not updated when the looping parameter is an internal object. The setpoints are not updated when there is a call to reset_time(). So, the setpoints will only be updated when the looping parameter has been explicitly created by the user.

(I've also converted tabs to spaces in the changed files.)

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